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Reactivation of methionine synthase from Thermotoga maritima (TM0268) requires the downstream gene product TM0269

机译:从海栖嗜热菌(TM0268)重新激活甲硫氨酸合酶需要下游基因产物TM0269

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摘要

The crystal structure of the Thermotoga maritima gene product TM0269, determined as part of genome-wide structural coverage of T. maritima by the Joint Center for Structural Genomics, revealed structural homology with the fourth module of the cobalamin-dependent methionine synthase (MetH) from Escherichia coli, despite the lack of significant sequence homology. The gene specifying TM0269 lies in close proximity to another gene, TM0268, which shows sequence homology with the first three modules of E. coli MetH. The fourth module of E. coli MetH is required for reductive remethylation of the cob(II)alamin form of the cofactor and binds the methyl donor for this reactivation, S-adenosylmethionine (AdoMet). Measurements of the rates of methionine formation in the presence and absence of TM0269 and AdoMet demonstrate that both TM0269 and AdoMet are required for reactivation of the inactive cob(II)alamin form of TM0268. These activity measurements confirm the structure-based assignment of the function of the TM0269 gene product. In the presence of TM0269, AdoMet, and reductants, the measured activity of T. maritima MetH is maximal near 80°C, where the specific activity of the purified protein is ∼15% of that of E. coli methionine synthase (MetH) at 37°C. Comparisons of the structures and sequences of TM0269 and the reactivation domain of E. coli MetH suggest that AdoMet may be bound somewhat differently by the homologous proteins. However, the conformation of a hairpin that is critical for cobalamin binding in E. coli MetH, which constitutes an essential structural element, is retained in the T. maritima reactivation protein despite striking divergence of the sequences.
机译:由结构基因组学联合中心确定的马氏嗜热菌基因产物TM0269的晶体结构是其全基因组全基因组结构覆盖的一部分,该晶体结构与钴胺素依赖性蛋氨酸合酶(MetH)的第四个模块具有结构同源性。大肠杆菌,尽管缺乏明显的序列同源性。指定TM0269的基因与另一个基因TM0268紧密相邻,TM0268与大肠杆菌MetH的前三个模块具有序列同源性。大肠杆菌MetH的第四个模块是辅因子的Cob(II)alamin形式的还原性甲基化所必需的,它结合了用于再活化的甲基供体S-腺苷甲硫氨酸(AdoMet)。在存在和不存在TM0269和AdoMet的情况下,对蛋氨酸形成速率的测量结果表明,TM0269和AdoMet都是重新活化TM0268的非活性Cob(II)alamin形式所必需的。这些活性测量结果证实了TM0269基因产物功能的基于结构的分配。在TM0269,AdoMet和还原剂存在下,在80°C附近测得的马氏木霉MetH活性最大,此时纯化的蛋白质的比活约为大肠杆菌蛋氨酸合酶(MetH)的15%。 37℃。 TM0269的结构和序列以及大肠杆菌MetH的再激活结构域的比较表明,AdoMet可能被同源蛋白结合有些不同。然而,尽管在序列上有很大的差异,但对于构​​成钴胺素的大肠杆菌MetH中的钴胺素结合至关重要的发夹构象仍保留在海里螺旋杆菌的活化蛋白中,构成了必不可少的结构元件。

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